PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV18613.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

G2-like

Protein Properties

Length: 401aa MW: 45253.6 Da PI: 9.7382

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV18613.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.5	2.3e-31	86	139	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +F++a+e+LGG+e+AtPk++l+lm+vkgL+++hvkSHLQ+YR KZV18613.1 86 PRLRWTPDLHLSFIHAIERLGGQERATPKSVLQLMNVKGLSISHVKSHLQMYRG 139 8****************************************************5 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	8.8E-29	82	139	IPR009057	Homeodomain-like
PROSITE profile	PS51294	10.534	82	142	IPR017930	Myb domain
SuperFamily	SSF46689	2.69E-14	84	139	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	8.9E-23	86	140	IPR006447	Myb domain, plants
Pfam	PF00249	1.9E-8	87	138	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence Send to blast
MDDEKMTTGS RDDDMETEQN KLSSDSSENI SSINLNEEAG SNTSIDDQAI EFSSNGEEIK 60 HEDSLKSAEG DEKKSAVRQY IRSKMPRLRW TPDLHLSFIH AIERLGGQER ATPKSVLQLM 120 NVKGLSISHV KSHLQMYRGK KLDESGKVIG QPSRFYSIPG RRYHLSGTAF GKFSPLHHLR 180 LQNGGIVLAQ GTDHGDRLRN SSHNSQSYPL EIKSLTSRFQ RWSSDNQEPK VRTNSRVITE 240 VNKQNKPIPS SIQSTEERYR TGPLRPNRFL EDRRWPPREE ILKTQFKEQK IPMSSILASA 300 VSQNFKSQPR WNFIDRSTGI CQQKSSFISE NSTLPLTIDS SLPVNETKEE KRIKGTDRLP 360 AGSDLQLSLS LSTNNSKDQK ACMKGGDSDI NTMLSLALTP H

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence Send to blast

MDDEKMTTGS RDDDMETEQN KLSSDSSENI SSINLNEEAG SNTSIDDQAI EFSSNGEEIK  60
HEDSLKSAEG DEKKSAVRQY IRSKMPRLRW TPDLHLSFIH AIERLGGQER ATPKSVLQLM  120
NVKGLSISHV KSHLQMYRGK KLDESGKVIG QPSRFYSIPG RRYHLSGTAF GKFSPLHHLR  180
LQNGGIVLAQ GTDHGDRLRN SSHNSQSYPL EIKSLTSRFQ RWSSDNQEPK VRTNSRVITE  240
VNKQNKPIPS SIQSTEERYR TGPLRPNRFL EDRRWPPREE ILKTQFKEQK IPMSSILASA  300
VSQNFKSQPR WNFIDRSTGI CQQKSSFISE NSTLPLTIDS SLPVNETKEE KRIKGTDRLP  360
AGSDLQLSLS LSTNNSKDQK ACMKGGDSDI NTMLSLALTP H

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	1e-17	87	138	3	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	1e-17	87	138	3	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	1e-17	87	138	3	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	1e-17	87	138	3	54	Protein PHOSPHATE STARVATION RESPONSE 1

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV18613.1

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011101395.1	1e-117	myb-related protein 2
Refseq	XP_020546992.1	1e-117	myb-related protein 2
TrEMBL	A0A2Z7AAB6	0.0	A0A2Z7AAB6_9LAMI; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5516	23	34

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	2e-36	G2-like family protein