PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV19024.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

ZF-HD

Protein Properties

Length: 99aa MW: 10976.4 Da PI: 9.7343

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV19024.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	45.3	2e-14	37	73	3	40
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaa 40 +v+Y+eClk +A s+G havDGC+Efmp ++e gt ++ KZV19024.1 37 SVTYRECLKYQAESTGNHAVDGCREFMPGRQE-GTRKS 73 689*************************9554.44443 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04770	8.8E-12	38	72	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profile	PS51523	14.256	40	96	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDom	PD125774	3.0E-6	40	70	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain

Sequence ? help Back to Top
Protein Sequence Length: 99 aa Download sequence Send to blast
MKFPFPLIGC QFTQDLDPTT VGTASRSRHQ LPHRQLSVTY RECLKYQAES TGNHAVDGCR 60 EFMPGRQEGT RKSSNAPPVI VTGTSIGERS KASRGLYFS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV19024.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2Z7AIJ9	5e-68	A0A2Z7AIJ9_9LAMI; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50890.1	8e-09	homeobox protein 28