PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV20164.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family TALE
Protein Properties Length: 392aa    MW: 43994 Da    PI: 7.0415
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV20164.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.41.4e-093183561854
                 HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
    Homeobox  18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                 lFe   ++yp+ +e+  LA+++gL+++qV++WF N R +
  KZV20164.1 318 LFEHflHPYPNDSEKLVLASQTGLSKNQVSNWFINARVR 356
                 5665569******************************88 PP
2BELL76.25e-251912531072
        BELL  10 akLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                  kLl ll+eV++rY+ y+  ++ ++s Fe++ag+g+ k+Yt+lAl+a+S+hF  L++a  +qi
  KZV20164.1 191 LKLLALLQEVERRYEEYYIHMEELVSCFETIAGVGAGKSYTALALQAMSKHFCILRNATLSQI 253
                 69********************************************************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005742.7E-19122251IPR006563POX domain
PfamPF075262.8E-29132248IPR006563POX domain
SMARTSM003891.7E-9300364IPR001356Homeobox domain
CDDcd000863.80E-11300361No hitNo description
Gene3DG3DSA:1.10.10.603.5E-26305366IPR009057Homeodomain-like
SuperFamilySSF466891.45E-17306369IPR009057Homeodomain-like
PfamPF059209.6E-17317356IPR008422Homeobox KN domain
PROSITE profilePS5007111.693319360IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    Send to blast
MRSEDSPSNS NSSILHQFLV SNSIAAQNQY ENQHFVACGT QSDSLPLDIQ SLGERMPRSV  60
DLLIAPQLSD ESDLRQCKRS MNLLETSAAH RPQRLSLSLG SVMDPGYIVY NNTTSDCCFA  120
GTGYTFIPSA ALGSSKYLKP AQSLLEEMVS IGSKEIDISN KRYVEKLSRS SKIGSSNEEL  180
SEKPGSCVHL LKLLALLQEV ERRYEEYYIH MEELVSCFET IAGVGAGKSY TALALQAMSK  240
HFCILRNATL SQIRAMKRKM EANMPRISSR LVQLSLLDQE SRHNRNALQL QQQLGITHSW  300
RLVRGLPENS LMILRAWLFE HFLHPYPNDS EKLVLASQTG LSKNQVSNWF INARVRLWKP  360
MIEQMYKEEF GGSSIESDEM LTTSAEGTGN LS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A4e-16306364563Homeobox protein Meis2
3k2a_B4e-16306364563Homeobox protein Meis2
5bng_A4e-16306364159Homeobox protein Meis2
5bng_B4e-16306364159Homeobox protein Meis2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV20164.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083617.11e-160BEL1-like homeodomain protein 11
SwissprotQ1PFD19e-76BLH11_ARATH; BEL1-like homeodomain protein 11
TrEMBLA0A2Z7AM270.0A0A2Z7AM27_9LAMI; Uncharacterized protein
STRINGVIT_18s0001g13130.t011e-134(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA86022228
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75430.12e-73BEL1-like homeodomain 11