PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV20607.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family B3
Protein Properties Length: 244aa    MW: 28144.1 Da    PI: 6.6378
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV20607.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.18.7e-1583178193
                 EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE...EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkl.iyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr.sefelv 93 
                 f+k l +sdv  +gr+v+pk+fa +h  +++++ ++ + + d ++ + W++++  ++++sgr +vl+    eF   +gL  gDf++F+ d+r  +f   
  KZV20607.1  83 FEKRLRHSDVKDRGRVVIPKEFALKHfpEIQTKYGIFMYMDDvTTPKLWTFRFgFWSNNSGRvHVLE-HACEFFAMHGLINGDFIMFYIDRRvGRF--A 178
                 899*************************888999999*****5555*******55577777779998.6779999*************88765554..5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.105.9E-1879177IPR015300DNA-binding pseudobarrel domain
CDDcd100177.98E-1581179No hitNo description
SuperFamilySSF1019365.62E-1682177IPR015300DNA-binding pseudobarrel domain
SMARTSM010190.002883183IPR003340B3 DNA binding domain
PfamPF023624.3E-1183178IPR003340B3 DNA binding domain
PROSITE profilePS508638.64283185IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    Send to blast
MRTARSKNRI FVADDCDEDG GLSRRENAKT RLENLRQKRK EKEREMAMAV PPAPPKRQWL  60
RPPMPSSLPP PQEVDMSGLE FLFEKRLRHS DVKDRGRVVI PKEFALKHFP EIQTKYGIFM  120
YMDDVTTPKL WTFRFGFWSN NSGRVHVLEH ACEFFAMHGL INGDFIMFYI DRRVGRFAIG  180
SRKADVQNSV RDEHHDLAGA TLMDELLSAS STSDGVGQSA VEDESLAYFP MELLDDDFFD  240
LPKL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j9b_A4e-24791901112B3 domain-containing transcription factor FUS3
6j9b_D4e-24791901112B3 domain-containing transcription factor FUS3
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV20607.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7AFQ40.0A0A2Z7AFQ4_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA80452125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.12e-27B3 family protein