PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV21014.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bZIP
Protein Properties Length: 168aa    MW: 19820.2 Da    PI: 6.7251
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV21014.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.76.7e-1573121553
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                 +++rr+++NRe+ArrsR RK++ ++eL   v  L +eN  L ++l+  +
  KZV21014.1  73 RKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENGHLMDRLNDFS 121
                 689***************************************9888765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.5E-1469133IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.56571134IPR004827Basic-leucine zipper domain
PfamPF001708.8E-1373122IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.57E-1373122No hitNo description
Gene3DG3DSA:1.20.5.1701.8E-1273145No hitNo description
CDDcd147021.35E-1974125No hitNo description
PROSITE patternPS0003607691IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
MQSSDFSELR YPLFPQLPSQ FPPQFPLAGI SPPPYHHLST PYLIQELSPQ QVTCSNSTSD  60
EADEQQVSII NERKQRRMIS NRESARRSRM RKQKHLDELW SQVVWLRNEN GHLMDRLNDF  120
SDRHDRVVQE NSQLKEEASE LRRMIVHMQI NSPFQGFTDL DHDHPSIK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18592RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV21014.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099071.12e-64basic leucine zipper 43
SwissprotQ9FMC26e-40BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A2Z7AH271e-120A0A2Z7AH27_9LAMI; Ocs element-binding factor 1-like
STRINGMigut.H00570.1.p6e-63(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9472492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.17e-50basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]