PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV21607.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family HSF
Protein Properties Length: 319aa    MW: 37015.2 Da    PI: 7.5275
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV21607.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1087.4e-34121032102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+++i++d++++++isws++  sf+v+d+++f++++Lpk+Fkh+nf+SFvRQLn+Y+F+k+++ +          eF++k+F +gkk+ll++ik
    KZV21607.1  12 FLRKTFDIVNDPNTDSIISWSSSRASFIVWDPNKFSTDLLPKHFKHNNFSSFVRQLNTYQFRKIDSVR---------CEFANKHFLQGKKHLLKNIK 99 
                   9*****************************************************************99.........67****************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+++
    KZV21607.1 100 RRNH 103
                   *986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004155.7E-538101IPR000232Heat shock factor (HSF)-type, DNA-binding
SuperFamilySSF467854.35E-328101IPR011991Winged helix-turn-helix DNA-binding domain
Gene3DG3DSA:1.10.10.107.7E-368101IPR011991Winged helix-turn-helix DNA-binding domain
PRINTSPR000562.0E-171235IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004472.1E-2912101IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000562.0E-175062IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS0043405175IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000562.0E-176375IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MEGIGEMGPP PFLRKTFDIV NDPNTDSIIS WSSSRASFIV WDPNKFSTDL LPKHFKHNNF  60
SSFVRQLNTY QFRKIDSVRC EFANKHFLQG KKHLLKNIKR RNHHPQIKGG MHISLDSNKS  120
RMEAEIEKLR SEQNATNEEI TMLRQQQEST QKQLASLKSR LDFTKMKQKH IVLFFMESLR  180
DPMFVQNFIE KTKNKRAPLE ILKKRRLNSC ESCDGNLFES RKTVDADDIN DVSLHEKAVL  240
SSDESCSYLL NHKAKTSSET SNLAECCENC FFWEELMEDD IIYQKEGEMV EPTKKQSDLI  300
LELEDLIVKL SPSCPASIT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5d5u_B2e-25310117129Heat shock factor protein 1
5d5v_B2e-25310117129Heat shock factor protein 1
5d5v_D2e-25310117129Heat shock factor protein 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
194100LKNIKRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV21607.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022856763.14e-98heat stress transcription factor A-2-like
TrEMBLA0A2Z7AQI10.0A0A2Z7AQI1_9LAMI; Uncharacterized protein
STRINGMigut.L01507.1.p2e-93(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA56812235
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.11e-59heat shock transcription factor A2