PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV21610.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 541aa    MW: 60563.6 Da    PI: 6.0388
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV21610.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.44.5e-12357401554
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 h ++Er+RR+++N++f+ Lr+llP        K +Ka++L  ++eY++ L
  KZV21610.1 357 HMINERKRREKLNESFQLLRSLLPLG-----SKKDKASVLSSTTEYLSLL 401
                 889**********************5.....499************9977 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.104352401IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.98E-16354418IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.14E-11354406No hitNo description
Gene3DG3DSA:4.10.280.102.4E-13356417IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-9357401IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.8E-12358407IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 541 aa     Download sequence    Send to blast
MDSIFLLDEG DRSAFLRHMI QSVGCCYICL WSFPPQSYNL LSFLDGIYHE ISSQQPSSSS  60
GSSLARRLFH EYSQSLSYVN TGRIPGFAFT NNVPYMELKE HDLQRMASSK VQLDFYQEAE  120
IKTVVFMSCA RGEIELGMCN EPQLDLRMEM NSIFPAIDFW QQATSTLGPQ PAVIDPNRPS  180
SSSSSLRSLS LDSSDQYSPL IFNIPAGSLV QEPQREAIIQ QSQVENALES VPFSAPSMPV  240
SVSPQQAVQD LSQLQNFPIT IEIADSAMTK AILAVLSSSS TSSSTQNIAP NLTISPASQN  300
ATPFQRYRMA LAPGVAARNR KSGMFRKALV FYRHLHLRRR QDLAIQENSP TPAQLHHMIN  360
ERKRREKLNE SFQLLRSLLP LGSKKDKASV LSSTTEYLSL LKSQVEELSK RNQILEGRLW  420
NKKEPTIQES VEGPSSSSSS VQRRVNVEMN RVLESTSEAR IMDLRVTVRG ECNLLDLISG  480
ILEFLKQQTN VSLLSIESNP TMGESDSVHG LVLRLKIEGD ELFDESTFQE VVRRVVDDST  540
H
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1360365ERKRRE
2361366RKRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV21610.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011094007.10.0putative transcription factor bHLH041
TrEMBLA0A2Z7AKD30.0A0A2Z7AKD3_9LAMI; Uncharacterized protein
STRINGMigut.J00583.1.p1e-150(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45672339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.12e-59bHLH family protein