PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV21670.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 370aa    MW: 41238 Da    PI: 5.3507
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV21670.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.25.5e-31146204259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  KZV21670.1 146 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 204
                 699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081132.81140206IPR003657WRKY domain
SuperFamilySSF1182902.48E-26144206IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.0E-30144206IPR003657WRKY domain
SMARTSM007741.4E-37145205IPR003657WRKY domain
PfamPF031067.1E-26147204IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MENYQGDLSD VIRRKGCSIE SGSAEQEWQF PNNQMNYSDE YFGDPFADLR DPFLDTSPPV  60
SGFLHEEDEM KRPSNTFSRM LPVAAAASDQ SLKAGCSFMD IPAAPLRIPS PRNTAIKRRK  120
SQAKKVVCIP APAPANSRPT GEIVPSDLWA WRKYGQKPIK GSPYPRGYYR CSSSKGCSAR  180
KQVERSRTDP NMLVITYTSE HNHPWPTQRN ALAGSTRSQT SKSTCTSKNS SNSLPQKSAN  240
PREEKKKMTK QLPIQENINN PVSVKEEMDE DFVNNLEMEV QADFDEAVLM PPSYKPTMPD  300
SSKSEESNFF VEIGEMESDP LNLLFAQDGL ICGGENKSLD PFSIYDWGSS SINTSISTCT  360
SSYAETKKDS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-26121207380Disease resistance protein RRS1
5w3x_D2e-26121207380Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV21670.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011096716.11e-122probable WRKY transcription factor 14
TrEMBLA0A2Z7AKM10.0A0A2Z7AKM1_9LAMI; Putative WRKY transcription factor 14
STRINGPOPTR_0001s46490.11e-110(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA67012433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.11e-76WRKY DNA-binding protein 14