PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV21671.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 270aa    MW: 30713.6 Da    PI: 5.325
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV21671.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.78.6e-08164208655
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 +++ r+RR++i ++ +eL +l+P         K++ ae+   A +YIk Lq
  KZV21671.1 164 SIAARQRRRKITDKTQELGKLIPGgH------KMNTAEMFHAAYKYIKFLQ 208
                 6788*******************955......******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.02E-12156218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.74E-8156211No hitNo description
PROSITE profilePS5088812.557158207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-11159226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.2E-8164213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.6E-5164208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MALSYYSNWD ACQHEFSSGA HTQTNEQLCW ELQDFSHNLA LADNSFNCVE HVFDPNSLFY  60
SLENYDPLIP HLLGTPTSDD LYLSNCASIT QARPSEEYDP LMYCPKRQKA AYIDYEEIYP  120
GAIYGLNSQE EVMHMLPDFP SGPPVYSGGI RCESSRKKSL SSQSIAARQR RRKITDKTQE  180
LGKLIPGGHK MNTAEMFHAA YKYIKFLQAQ VGILQSMETS DHKQMELQEY LHGLLESPVV  240
QEKLYSMEKC LVPQNIGCNQ ICSLRAESIN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1155172RKKSLSSQSIAARQRRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV21671.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022893750.13e-63transcription factor bHLH52-like
RefseqXP_022893751.13e-63transcription factor bHLH52-like
TrEMBLA0A2Z7AIR10.0A0A2Z7AIR1_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA38562246
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34820.11e-24bHLH family protein