PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV21793.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family B3
Protein Properties Length: 161aa    MW: 18159.5 Da    PI: 4.7515
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV21793.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.71e-1342133197
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                 f+ vlt +   +s+ l+lp + ae     ++ ++ +tl+  +g++W+  +  r+ s+r   + + Wk F+++n+Lk gD +vF+l ++s+++l++kv+
  KZV21793.1  42 FDVVLTEAQLQRSSALMLPGHIAELL---PRATVPVTLT-YNGKEWNSSY--RGESSRhPRFDSRWKVFARDNDLKCGDACVFELLENSKENLRFKVI 133
                 677888899999999****9999544...3444556654.59********..777777699***********************99999999999875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.103.1E-1539136IPR015300DNA-binding pseudobarrel domain
CDDcd100173.05E-1640136No hitNo description
SuperFamilySSF1019361.0E-1640137IPR015300DNA-binding pseudobarrel domain
PfamPF023621.7E-1142133IPR003340B3 DNA binding domain
PROSITE profilePS5086311.84342138IPR003340B3 DNA binding domain
SMARTSM010191.2E-742138IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
MADVSGNNSI LLKEKASLER FGSTSESPQV EEDSYLQGGP FFDVVLTEAQ LQRSSALMLP  60
GHIAELLPRA TVPVTLTYNG KEWNSSYRGE SSRHPRFDSR WKVFARDNDL KCGDACVFEL  120
LENSKENLRF KVIILRCDLP PELVEMVDSR GKSFDSPIFL E
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV21793.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831373.12e-45PREDICTED: B3 domain-containing protein Os04g0386900-like
TrEMBLA0A2Z7AJA21e-115A0A2Z7AJA2_9LAMI; Uncharacterized protein
STRINGMigut.N01674.1.p8e-45(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA18192154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31680.13e-06B3 family protein