PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV23275.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

Dof

Protein Properties

Length: 287aa MW: 31784.2 Da PI: 7.0756

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV23275.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.6	7.6e-40	32	92	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprC+st+tkfCyynnyslsqPryfCkaCrryWtkGG+lrn+PvGgg+rk++kss KZV23275.1 32 HEQALKCPRCESTHTKFCYYNNYSLSQPRYFCKACRRYWTKGGTLRNIPVGGGCRKKRKSS 92 7899*****************************************************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	3.0E-26	30	85	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	3.4E-33	34	90	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.845	36	90	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	38	74	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence Send to blast
MDSSPITPQS DQDDMLTCTA TLLERRVIRP QHEQALKCPR CESTHTKFCY YNNYSLSQPR 60 YFCKACRRYW TKGGTLRNIP VGGGCRKKRK SSAKKSSSSS GDDQNPQQTK GAALSPSPLS 120 SYYSDINNTN ADSADQFSLA FPGQLHFPSL HSNGISNSNM NSHHSFLLEN PAPVDHFSEN 180 RYASLFEGRD FMGIHGDNNV FPPISDNFGG IFYQPGIGNL TAGMQYENHH EVDLKPTNAS 240 KILSLEWHNL QPEACNAETG IDYPGGINGS WTGLMEPFGS SSVNRML

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV23275.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011071865.1	2e-61	dof zinc finger protein DOF5.6 isoform X1
TrEMBL	A0A2Z7ANB2	0.0	A0A2Z7ANB2_9LAMI; Dof-type zinc finger DNA-binding family protein isoform 1

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4895	22	40

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62940.1	6e-34	Dof family protein