PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV23311.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family Nin-like
Protein Properties Length: 259aa    MW: 29472.7 Da    PI: 6.5171
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV23311.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK81.49.4e-26138185451
      RWP-RK   4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 
                 ++  e++skyF+lpi++AAkeL+v++T+LK++CR +GIkRWPhRk+ s
  KZV23311.1 138 TLCRETISKYFHLPITQAAKELNVGPTLLKKKCRDLGIKRWPHRKLIS 185
                 67789****************************************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.45123208IPR003035RWP-RK domain
PfamPF020422.3E-21139185IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MAAANKEYED IYCHFPTFLY DDDHSSTNGS FSAWNWQLGI LENDRIVDPF PLMDTFVSSS  60
DIVASSGLVP VPDFLCDDIK GAFEVRNEGT ASGLEVQTKE QKFPPNNDFI TGEAIQDCES  120
EAKRSKLVAR NSAPRSRTLC RETISKYFHL PITQAAKELN VGPTLLKKKC RDLGIKRWPH  180
RKLISMQTLI KNVQELWEYE GEEKVKQAIC LLEEEMKLMI EIPEMEIGGS TKRLRQACFK  240
ANYKKRKLVI PQYSASPLS
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV23311.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7ANE40.0A0A2Z7ANE4_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA42742142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.18e-38RWP-RK domain-containing protein