PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV23747.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 276aa    MW: 30535 Da    PI: 5.0403
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV23747.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.61.3e-2879136359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D ++WrKYGqK++kgs++pr+YY+C+s+ gCp++k+ver++ dp++v++ Y+ eHnh+
  KZV23747.1  79 DSCTWRKYGQKPIKGSPYPRGYYKCSSSkGCPARKQVERCRMDPNMVVVAYSREHNHP 136
                 899***********************998****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.7E-3071138IPR003657WRKY domain
SuperFamilySSF1182903.4E-2576138IPR003657WRKY domain
SMARTSM007742.4E-3277137IPR003657WRKY domain
PROSITE profilePS5081130.20579138IPR003657WRKY domain
PfamPF031061.5E-2479136IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    Send to blast
MDDGFNSTRL VSGIQDSENS TENSGDPPGS AVSNELKIAS TSTRRSGRKA IPKRIISVPL  60
KEAAGLKQKG EQMSAPPWDS CTWRKYGQKP IKGSPYPRGY YKCSSSKGCP ARKQVERCRM  120
DPNMVVVAYS REHNHPMPPR SNHRTTTNRR ATARSGEEEE EEEELPQEEE KKPVINLSIE  180
SHVIITDDRF SNVCGGSLSS GGEFGWLTDF ESTSSCSILD SPVLAEELRV AMDDEMAMIF  240
EVREEDESLF ADLGELPECS TVFRRGRGGE TAVLHG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B9e-18791381879Disease resistance protein RRS1
5w3x_D9e-18791381879Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV23747.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022847988.15e-91probable WRKY transcription factor 65 isoform X1
TrEMBLA0A2Z7AWQ00.0A0A2Z7AWQ0_9LAMI; WRKY transcription factor
STRINGXP_009595576.14e-76(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA64752333
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.15e-65WRKY DNA-binding protein 65