PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV24449.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 174aa    MW: 20046.4 Da    PI: 10.4474
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV24449.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY28.92.3e-0994112119
                 ---SS-EEEEEEE--TT-S CS
        WRKY   1 ldDgynWrKYGqKevkgse 19 
                 ldDgy+WrKYGqK vk+++
  KZV24449.1  94 LDDGYRWRKYGQKAVKNTN 112
                 59**************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.8E-1179114IPR003657WRKY domain
SuperFamilySSF1182904.18E-886113IPR003657WRKY domain
PROSITE profilePS5081110.87789111IPR003657WRKY domain
SMARTSM007740.006794126IPR003657WRKY domain
PfamPF031064.1E-695114IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    Send to blast
MENIYPSMFP SSSSNHQNSH FPRINIASSH AQDQEFQDHK PFNHIGYITS LESSATVPIS  60
NEVENDDNSS KKKGQKKSRK PRFAFQTRSQ VDILDDGYRW RKYGQKAVKN TNSQGSSLNP  120
GLRYSTSRVQ IWIWNYSIVK YTEIRRRTLE GFVARLVVRG AVAAPATYWI RCWG
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV24449.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022878240.12e-25probable WRKY transcription factor 75
RefseqXP_022880985.11e-25probable WRKY transcription factor 56
TrEMBLA0A2Z7AYB21e-127A0A2Z7AYB2_9LAMI; Uncharacterized protein
STRINGXP_006484154.14e-22(Citrus sinensis)
STRINGXP_006437986.14e-22(Citrus clementina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22042461
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.16e-15WRKY DNA-binding protein 75