PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV24647.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 250aa    MW: 27691.6 Da    PI: 6.8014
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV24647.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.47.9e-11134181455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  KZV24647.1 134 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 181
                 8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.29E-10128185No hitNo description
SuperFamilySSF474598.9E-18128197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.4E-18130196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.828130180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.4E-8134181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-10136186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MNDGAGGAYN FSEIWPGFHA NAASYALAMN PPEMDHISNR GPVNYNNSKK RRDEDECAKG  60
GASTSNSDND NLIEGDGKRL KAEGISNGDR ESKAQREDVR NSGKVTDKSA AKAAEPPKQD  120
YIHVRARRGQ ATDSHSLAER ARREKISERM KILQDLVPGC NKVIGKALVL DEIINYIQSL  180
QRQVEFLSMK LEAVNSREGI YGSYPSKDFS QHTFETPGMP FDSQGAREYG RDSSPEWLHM  240
QIGGSLERPS
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV24647.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011071046.11e-110transcription factor bHLH79-like
SwissprotQ69WS35e-69BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A2Z7AZF80.0A0A2Z7AZF8_9LAMI; Uncharacterized protein
STRINGMigut.L01368.1.p1e-103(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12872471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.11e-75BIG PETAL P