PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV24722.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

bHLH

Protein Properties

Length: 587aa MW: 65031.9 Da PI: 7.1978

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV24722.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19	2.5e-06	90	119	8	37
HHHHHHHHHHHHHHHHHCTSCCC...TTS- CS HLH 8 rErrRRdriNsafeeLrellPkaskapskK 37 Er RR+++++ f++L llP+++ +++K KZV24722.1 90 TERERRKKMRNMFANLHALLPHLPPKTQQK 119 7*********************64444444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	2.31E-4	80	117	No hit	No description
SuperFamily	SSF47459	1.6E-6	81	118	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	8.556	82	134	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.0E-4	87	119	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:3.30.70.260	9.4E-4	331	391	No hit	No description
CDD	cd04873	8.91E-4	334	376	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 587 aa Download sequence Send to blast
MAEVHGSQDD SLSWDDQVWS FPNLGNRETN PVFETSNNSD GQKPETQREE APPAAKGRKR 60 NSVSKGCNTG GVHDKEDGGR ESEHELHIWT ERERRKKMRN MFANLHALLP HLPPKTQQKF 120 SSNANSAATQ IQQQHKFSGN ANSAVGHSAT QIKRLEFSDA TFGSWTFGDA NSAAGDLATQ 180 TSSSPRNFII QISRNPDFCS RTSTVAYSFE HSINDLKAYC PEPIATAPFL RIRSPPSRIF 240 FPMFQILGPV SGRDKKAQKL QHGITNPFKI NRQNLGLIQS REVFLADEGP EARNSNPYLQ 300 SPMSVSGCHE LPTFFNTWTS PNVTLSVCGE DAHISVCGSR KPGLLTAICF VMEKLGMEVI 360 TAQVSSDANR CMYMFHAHML AGNTTREVES DTVAEQELKT VKRDFGGLNE GIWPKSSLGH 420 LTKFNELCSL DRSGESSTGL IRKYAGRLRL LPCWQLVPGS DRFRKENGTS RCNSDAVQTM 480 LISCCANVNE LDVDVKSNLE SAMMTSAFLL EEAVISNYDA IQTRARNTTR EVESDTVAEQ 540 ELKTVKRDFG GLNEGIWMKG ILGHLTKFNE LCSLDRSGGS SMISWST

Sequence ? help Back to Top

Protein Sequence Length: 587 aa Download sequence Send to blast

MAEVHGSQDD SLSWDDQVWS FPNLGNRETN PVFETSNNSD GQKPETQREE APPAAKGRKR  60
NSVSKGCNTG GVHDKEDGGR ESEHELHIWT ERERRKKMRN MFANLHALLP HLPPKTQQKF  120
SSNANSAATQ IQQQHKFSGN ANSAVGHSAT QIKRLEFSDA TFGSWTFGDA NSAAGDLATQ  180
TSSSPRNFII QISRNPDFCS RTSTVAYSFE HSINDLKAYC PEPIATAPFL RIRSPPSRIF  240
FPMFQILGPV SGRDKKAQKL QHGITNPFKI NRQNLGLIQS REVFLADEGP EARNSNPYLQ  300
SPMSVSGCHE LPTFFNTWTS PNVTLSVCGE DAHISVCGSR KPGLLTAICF VMEKLGMEVI  360
TAQVSSDANR CMYMFHAHML AGNTTREVES DTVAEQELKT VKRDFGGLNE GIWPKSSLGH  420
LTKFNELCSL DRSGESSTGL IRKYAGRLRL LPCWQLVPGS DRFRKENGTS RCNSDAVQTM  480
LISCCANVNE LDVDVKSNLE SAMMTSAFLL EEAVISNYDA IQTRARNTTR EVESDTVAEQ  540
ELKTVKRDFG GLNEGIWMKG ILGHLTKFNE LCSLDRSGGS SMISWST

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV24722.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2Z7AZR0	0.0	A0A2Z7AZR0_9LAMI; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49770.1	1e-13	bHLH family protein