PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV24982.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family Dof
Protein Properties Length: 228aa    MW: 24156.3 Da    PI: 8.8888
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV24982.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof121.62.7e-382382362
      zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                 ++l+cprCds ntkfCyynny+ sqPr+fCk+CrryWt+GG+lr++P+Ggg+rkn k+s
  KZV24982.1 23 PEHLPCPRCDSINTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPIGGGSRKNAKRS 82
                57899***************************************************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074788.0E-282180IPR003851Zinc finger, Dof-type
PfamPF027012.3E-332580IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.9842680IPR003851Zinc finger, Dof-type
PROSITE patternPS0136102864IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MASEVTERKT TKSSHAGVQP PEPEHLPCPR CDSINTKFCY YNNYNFSQPR HFCKSCRRYW  60
THGGTLRDIP IGGGSRKNAK RSRIGVADAS SGAVTPFSSP RQDFRRLPGM SSQFLMPITA  120
DHGPAAVPFM EVKAGLNLNA CGSYTSLLNT QGTGLLALGG FGLGIGPASE DMGFSLGRSV  180
WPFAGMLEGG PTGVGAMSGD TWQSENGRGG FVGNGDCFSV LAPASLLK
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV24982.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099306.17e-94dof zinc finger protein DOF3.4
TrEMBLA0A2Z7B0F11e-167A0A2Z7B0F1_9LAMI; Uncharacterized protein
STRINGMigut.H00486.1.p2e-78(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45322241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50410.12e-43OBF binding protein 1