PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV25018.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family Dof
Protein Properties Length: 211aa    MW: 23892.8 Da    PI: 8.5653
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV25018.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof90.91.1e-281066662
      zf-Dof  6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                l+c rCdst+tkf yynn    qPr++Ck+C+ryWt GG++r+vP+Gg+rr  k ss
  KZV25018.1 10 LRCHRCDSTDTKFRYYNNNDRRQPRHYCKTCKRYWTVGGSMRDVPLGGTRRPAKDSS 66
                78*************************************************999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-15163IPR003851Zinc finger, Dof-type
PfamPF027015.2E-261063IPR003851Zinc finger, Dof-type
PROSITE profilePS5088423.1981064IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MQQEEQYGPL RCHRCDSTDT KFRYYNNNDR RQPRHYCKTC KRYWTVGGSM RDVPLGGTRR  60
PAKDSSSQLY TRISVSSSRL RHPDPVAAAG SPKIEPIIPP ADEISCLAAI RSLTKPDMAI  120
LQERCFRSMG LNLNEPLPQH LPTYGGNPTS WPMITPLPPQ DFNDDLSFAA ANAGIWYNSN  180
GNTDEPGKAP TSVDLNYWPQ SPKFTEQHFY K
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV25018.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7AUH01e-157A0A2Z7AUH0_9LAMI; Uncharacterized protein
STRINGMigut.H00616.1.p5e-21(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.15e-22Dof family protein