PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV25351.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 298aa    MW: 33576.7 Da    PI: 6.3202
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV25351.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.12.4e-11152199455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  hn +Er RR+riN+++  L+ l+P +    +k + Ka +L + ++YI s+q
  KZV25351.1 152 RHNLAERIRRERINERMKFLQGLVPGC----DKIMGKAVMLDEIINYILSMQ 199
                 59************************9....899****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.072148198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.6E-15149212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.88E-16150212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.3E-9152199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-9154204IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MGSDSGNERR TTEDITRATS SHSIDGFSFV MPENRVCITE DELFKHLVEM ETTEFTVLSN  60
ENVSKISASV HNPNDFFDQM ASERCQNGSF VQSLEPSSCR KRRKTVADGE SELSDSKDAR  120
NSIKGNGNQD IENFEEQLDH KPAAQRAHST NRHNLAERIR RERINERMKF LQGLVPGCDK  180
IMGKAVMLDE IINYILSMQH QIEFLYRKLA AVNLSEKSQL LSNDILGTKK TISSSYICPV  240
VGSLYKQSAD GLVFMESAVE LAMETSKVES AVRNQARAKL NQLKHDEPTE TMTTSCKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV25351.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7ATV30.0A0A2Z7ATV3_9LAMI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26260.32e-22cryptochrome-interacting basic-helix-loop-helix 5