PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV25641.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family G2-like
Protein Properties Length: 349aa    MW: 40373.9 Da    PI: 8.5384
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV25641.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like64.81.5e-20101154155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 kpr+ Wt eL  +F +a++ L G+ekA Pk+il+lm++  +tl +v SHLQkYR 
  KZV25641.1 101 KPRMSWTDELRLKFEKAIRIL-GEEKARPKEILKLMNMSNVTLRNVSSHLQKYRE 154
                 79*******************.********************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23007.1E-4176No hitNo description
PROSITE profilePS512949.62998157IPR017930Myb domain
SuperFamilySSF466893.05E-1599158IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.5E-2199158IPR009057Homeodomain-like
TIGRFAMsTIGR015571.8E-18101156IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MSYDDDNDVL RKALIQPACF FLRKPISPQV LAGVWQHVFR VRKMRTMQSM DGIWEGNNIE  60
INGECPQVQD KVHATDTQNL SVMNQENDEE SEIVDQRVNK KPRMSWTDEL RLKFEKAIRI  120
LGEEKARPKE ILKLMNMSNV TLRNVSSHLQ KYREKKKRAG INCGTAGSST HKFKLTNMYF  180
EMERDYQNGK PWDLHDICCK KWPVAGTMSK TRRQYALQQH NSEYSSVHYQ IDMVNKLLDK  240
GKGKRISNYD DIKGCMKGGC CKELHVETSF MHRSNPNGAE ARIFRHKETL NPAAIFQPYV  300
PDICEDYRDS NECSDINNHL NMDMGFTLRK TNGSGMLEDI IFSSHGHGN
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV25641.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7AUQ60.0A0A2Z7AUQ6_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1550856
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.25e-21response regulator 1