PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV26208.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 475aa    MW: 51898 Da    PI: 4.8908
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV26208.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.75.8e-10182229455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k + Ka  L + ++Y+ksLq
  KZV26208.1 182 SHSLAERVRREKISERMKYLQDLVPGC----NKIMGKAGLLDEIINYVKSLQ 229
                 8**************************....999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.16E-16176247IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.10E-9176233No hitNo description
Gene3DG3DSA:4.10.280.103.5E-16178240IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.58178228IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.3E-7182229IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.0E-9184234IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    Send to blast
MNCAFPEMLR CLDSAGSISG DNGEMGVFSF PIQSLHGDQS LNELVSGRAM KPDPGVGVDW  60
DLGSEFEMGC VVPRTAGCVQ PAEEVTGNID PVGDFFPGML CSAAGGGGSK KRKADTIGNF  120
EVDDEQSQEK RMKESVEESS DRKSTKNEPA SAMNSKVKTM VPESPKPDYI HVRARRGQAT  180
DSHSLAERVR REKISERMKY LQDLVPGCNK IMGKAGLLDE IINYVKSLQG QVEFLSMKLA  240
VINPAQEFYV DNLLPKVMLP APISDIHTTG VSPEIVNPAL VPFNSMAQGV PFRGLETGVN  300
PSDDTVETQL LDSSYLNQFD YSNLGSELQN LYGLEYQQAR SASYAPQPFP ENPGTIRISL  360
FMQQANKIPA EKISPPEISA EICSSQSPSP SIKIRALPTL GIGVVSPDTL SAPLTCYLWL  420
HTPRRSTFHL PVPEARRPEL DLLTLHPEAV SALRLDKIWM LIVHAADLGR SILEQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV26208.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011088410.12e-92transcription factor bHLH63 isoform X2
TrEMBLA0A2Z7AXZ20.0A0A2Z7AXZ2_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA65382330
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.11e-48cryptochrome-interacting basic-helix-loop-helix 1