PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV26720.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 236aa    MW: 25651.8 Da    PI: 10.0767
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV26720.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.25.5e-203181256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                ++ GVr+++ +grWvAeI+d s   +r r +lg+++t+eeAa+a+++a+++++ge
  KZV26720.1 31 RFVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARAIRGE 81
                589******.7*********43...36*************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.0E-153181IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-283188IPR001471AP2/ERF domain
SMARTSM003807.3E-353194IPR001471AP2/ERF domain
CDDcd000184.82E-313189No hitNo description
PROSITE profilePS5103220.4023188IPR001471AP2/ERF domain
SuperFamilySSF541714.51E-203288IPR016177DNA-binding domain
PRINTSPR003672.0E-73243IPR001471AP2/ERF domain
PRINTSPR003672.0E-75470IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MAGGDIAKTT VATATIMTKQ QPAKSSTSQR RFVGVRQRPS GRWVAEIKDS SQRVRLWLGT  60
YDTPEEAARA YDEAARAIRG ENARTNFAAP TINANDTDGE RGLGFSSLKA KLGRKIVHRS  120
IMARDSANGS SRVSDHFTFA SIFHFKNHPA ASDIKRIIDH KMVKPSEIVP HARESSTGFF  180
GFGQHGLMDL EGSDTSPEII TSCGIGNECC TSKRFKVSSS VIVPPTFSTD PPIHGD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-1431871471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV26720.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011094665.15e-77ethylene-responsive transcription factor ERF087-like
TrEMBLA0A2Z7B0E41e-174A0A2Z7B0E4_9LAMI; Uncharacterized protein
STRINGPOPTR_0014s07280.15e-71(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA125641721
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-17related to AP2 11