PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV26769.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family TALE
Protein Properties Length: 435aa    MW: 48918 Da    PI: 6.3062
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV26769.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.31.5e-093553921954
                 HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
    Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                 Fe   ++yp+++e+  LA+++gL+++q+++WF N R +
  KZV26769.1 355 FEHflHPYPNESEKLMLASQTGLSKNQISNWFINARVR 392
                 664459******************************88 PP
2BELL85.85e-282282901072
        BELL  10 akLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                  kLl ll+eV++rY+ y++ ++ ++ssFe++aglg+ k+Yt lAl+a+S+hF +L+ ai +qi
  KZV26769.1 228 LKLLALLDEVERRYEEYYNHMEELVSSFEVIAGLGAGKSYTLLALQAMSKHFCSLRKAILSQI 290
                 59***********************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005749.4E-21151288IPR006563POX domain
PfamPF075261.2E-30157286IPR006563POX domain
PROSITE profilePS5007112.034333396IPR001356Homeobox domain
CDDcd000862.26E-11336397No hitNo description
SMARTSM003897.7E-10336400IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.1E-27341402IPR009057Homeodomain-like
SuperFamilySSF466892.05E-17342403IPR009057Homeodomain-like
PfamPF059209.8E-18353392IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    Send to blast
MVSEDSPSDS NSSIVHQFII SNSIADQNQF SNQHFDAYGT DSVSDIPYAQ SLPLSIQCLG  60
DRSVDLHTSQ VSDESHASHG TRLMDLLGTS NESAHQAQRL SLSLGSVSCR QIDPGYLHTA  120
FDRMINDYSF VRNGFIAGSQ NQSCSISHGT ESFSAAIGSS KYLKPTQSLL EEMVGIGGKD  180
MDAGNQKYVE KLSHGGLKGF FRLASEIKAE FFSNELLSEK HGTFVSLLKL LALLDEVERR  240
YEEYYNHMEE LVSSFEVIAG LGAGKSYTLL ALQAMSKHFC SLRKAILSQI RVSKRKIEKD  300
MPRISARLSQ LSLFDQESRH HRIPLQQIIQ NSRQAWRPIR GLPENSVMIL RAWLFEHFLH  360
PYPNESEKLM LASQTGLSKN QISNWFINAR VRLWKPMIEE MYKEEFAESW TESDQVLARS  420
CTTREGAGDS AEELS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A1e-16342399158Homeobox protein Meis1
4xrs_B1e-16342399158Homeobox protein Meis1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV26769.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083617.10.0BEL1-like homeodomain protein 11
SwissprotQ1PFD14e-92BLH11_ARATH; BEL1-like homeodomain protein 11
TrEMBLA0A2Z7B4Y40.0A0A2Z7B4Y4_9LAMI; Uncharacterized protein
STRINGVIT_18s0001g13130.t011e-172(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA86022228
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75430.15e-90BEL1-like homeodomain 11