PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV26830.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 166aa    MW: 18045.4 Da    PI: 9.7655
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV26830.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.78.1e-201564255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++kGVr +k +g+WvAe+r p++   r r++lg++ t+eeAa+a++aa+ +l+g
  KZV26830.1 15 HFKGVRMRK-WGKWVAEVRQPKS---RDRIWLGSYETPEEAARAYDAAMVCLRG 64
                69*****99.*******999854...4*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.2E-131564IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-291573IPR001471AP2/ERF domain
CDDcd000183.17E-291574No hitNo description
PROSITE profilePS5103222.3131572IPR001471AP2/ERF domain
SuperFamilySSF541711.9E-211573IPR016177DNA-binding domain
SMARTSM003805.3E-361578IPR001471AP2/ERF domain
PRINTSPR003673.8E-91627IPR001471AP2/ERF domain
PRINTSPR003673.8E-93854IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
MGRPDQSRKE RRVGHFKGVR MRKWGKWVAE VRQPKSRDRI WLGSYETPEE AARAYDAAMV  60
CLRGPSVVLN FPNDPPPSFL ASGDEFSRSQ IQVAASKHAR GMSAVPTPDT AAGMELVQPA  120
VQGMLFGESM EAGSSSLGQL RDGESCLQSG GGNTGGLFAT SRLWNF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-1614741374Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV26830.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012851158.13e-53PREDICTED: ethylene-responsive transcription factor ERF017-like
TrEMBLA0A2Z7B0Q11e-118A0A2Z7B0Q1_9LAMI; Uncharacterized protein
STRINGMigut.J00902.1.p2e-46(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.14e-34ERF family protein