PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV27164.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 703aa    MW: 75814.6 Da    PI: 6.2981
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV27164.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.21.4e-32296352259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers+ +++++ei+Y+g Hnh+
  KZV27164.1 296 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSE-EGDITEIIYKGAHNHT 352
                 7***************************************9.***************8 PP
2WRKY104.46.2e-33497555159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDgy+WrKYGqK+vkg+++prsYY+Cts++C+v+k+ver+++d k v++tYeg+Hnh+
  KZV27164.1 497 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSPSCNVRKHVERASHDLKSVITTYEGKHNHD 555
                 59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081122.917290354IPR003657WRKY domain
Gene3DG3DSA:2.20.25.808.0E-29293354IPR003657WRKY domain
SuperFamilySSF1182901.83E-25294354IPR003657WRKY domain
SMARTSM007742.2E-36295353IPR003657WRKY domain
PfamPF031062.7E-25296351IPR003657WRKY domain
Gene3DG3DSA:2.20.25.806.7E-37482557IPR003657WRKY domain
SuperFamilySSF1182902.09E-28489557IPR003657WRKY domain
PROSITE profilePS5081137.551492557IPR003657WRKY domain
SMARTSM007741.5E-37497556IPR003657WRKY domain
PfamPF031061.5E-24498555IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0009942Biological Processlongitudinal axis specification
GO:0030010Biological Processestablishment of cell polarity
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 703 aa     Download sequence    Send to blast
MFDDHTSIMG EWLAPNQSLS GRNFAAIMND VKTSSVDVFV TENKSGHLLS GNLESGNQGS  60
AFVVGKEEGN SNAARQMSSR GGLVERMAAR AGINVPRLDT DSIKPADLSK IPEVQSPYLT  120
IPPGLSPTTL LDSPVFLSNA SVLPSPTTGK FLFTSTGNNL NTTFMAEDHG MSKRNTCVDT  180
NASSFALQTV AESGLSRCFN TVDKVNHPCS LPPYASVGVY SAEPLTAPPQ NNGMFFQQTY  240
YPISYAEDNG ISNLSSEPTY NSADASKHSP PVDEPQEDDG DQLSNGDPNA GGSPSEDGYN  300
WRKYGQKQVK GSEYPRSYYK CTHPNCPVKK KVERSEEGDI TEIIYKGAHN HTKPPFNRRL  360
ALGSSNPQGD VQLGSERHAI RVVDAHMWST LQKGNLEVTQ SAGLSQEYGI GTNSLHSQTC  420
QLELGDGVEG SSTFSNEDDD DDGATHGSVS FGYNGEGDES ESKRRRIERY ASEISGATRA  480
IREPRVVVQT TSEVDILDDG YRWRKYGQKV VKGNPNPRSY YKCTSPSCNV RKHVERASHD  540
LKSVITTYEG KHNHDIPAAR NSSHVNSGSQ QASAAATSSS LVRRAQPSEI HASTSPFETP  600
SIGSFGRPQL GPGPGFGFGF GVNQPGFASL ALAGLGPNPS RLPILPVHSY FRDQAGPMGN  660
NLGFMMPRGE PKMEPITDSG LNPSNASSVY QQLMSRLPLG PQM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-37296558878Probable WRKY transcription factor 4
2lex_A3e-37296558878Probable WRKY transcription factor 4
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1462466KRRRI
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00071PBMTransfer from AT5G56270Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV27164.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011095658.10.0probable WRKY transcription factor 2
TrEMBLA0A2Z7AZ400.0A0A2Z7AZ40_9LAMI; Putative WRKY transcription factor 2
STRINGGorai.004G034600.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37112341
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.11e-144WRKY DNA-binding protein 2