PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV27222.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family NAC
Protein Properties Length: 258aa    MW: 29625.3 Da    PI: 8.9593
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV27222.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM170.94.1e-53141391128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 lppGfrF Ptdeel+v+yL++kv+g +++l ++i e+d+yk++PwdLp+k+  +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk +++ +g++
  KZV27222.1  14 LPPGFRFFPTDEELLVQYLCRKVAGLHFPL-QIIGEIDLYKFDPWDLPRKAVFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITT-EGRK 110
                 79****************************.89***************8777899***********************************9999.999* PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 vg+kk+Lvfy+g+apkg+ktdW+mheyrl
  KZV27222.1 111 VGIKKSLVFYEGKAPKGSKTDWIMHEYRL 139
                 ***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-677163IPR003441NAC domain
PROSITE profilePS5100561.09714162IPR003441NAC domain
PfamPF023656.7E-2615139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009737Biological Processresponse to abscisic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
MVFSRSDTVS QMNLPPGFRF FPTDEELLVQ YLCRKVAGLH FPLQIIGEID LYKFDPWDLP  60
RKAVFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKIITTEGRK VGIKKSLVFY  120
EGKAPKGSKT DWIMHEYRLS EPSRKHGSSK LDDWVLCRIY KKNSSKQSQS SCEIESREYS  180
HGSSPSSSSH YDVVLESLEH IDDRFANLPR MDSLKLNLQN WGSGNFDWAT LAGLNSLPEY  240
VQAQQSQPYR DDVSSSKL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-10011674170NO APICAL MERISTEM PROTEIN
1ut4_B1e-10011674170NO APICAL MERISTEM PROTEIN
1ut7_A1e-10011674170NO APICAL MERISTEM PROTEIN
1ut7_B1e-10011674170NO APICAL MERISTEM PROTEIN
3swm_A1e-10011677173NAC domain-containing protein 19
3swm_B1e-10011677173NAC domain-containing protein 19
3swm_C1e-10011677173NAC domain-containing protein 19
3swm_D1e-10011677173NAC domain-containing protein 19
3swp_A1e-10011677173NAC domain-containing protein 19
3swp_B1e-10011677173NAC domain-containing protein 19
3swp_C1e-10011677173NAC domain-containing protein 19
3swp_D1e-10011677173NAC domain-containing protein 19
4dul_A1e-10011674170NAC domain-containing protein 19
4dul_B1e-10011674170NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that acts downstream of MYC2 in the jasmonate-mediated response to Botrytis cinerea infection (PubMed:28733419). With MYC2 forms a transcription module that regulates wounding-responsive genes (PubMed:28733419). Involved in jasmonate- and coronatine-mediated stomatal reopening in response to Pseudomonas syringae pv tomato DC3000 infection (PubMed:25005917). Regulates the expression of threonine deaminase 2 (TD2) through promoter binding (PubMed:28733419). {ECO:0000269|PubMed:25005917, ECO:0000269|PubMed:28733419}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV27222.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by jasmonate (JA) (PubMed:25005917, PubMed:28733419, PubMed:30610166). Induced by wounding (PubMed:28733419, PubMed:25005917). Induced by infection with the fungal pathogen Botrytis cinerea (PubMed:28733419). Induced by coronatine (PubMed:25005917). {ECO:0000269|PubMed:25005917, ECO:0000269|PubMed:28733419, ECO:0000269|PubMed:30610166}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011095243.11e-136NAC domain-containing protein 72
SwissprotA0A3Q7HH641e-125JA2L_SOLLC; NAC domain-containing protein JA2L
TrEMBLA0A2Z7B6S10.0A0A2Z7B6S1_9LAMI; NAC domain-containing protein 72-like
STRINGMigut.M00863.1.p1e-133(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31222452
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-115NAC family protein
Publications ? help Back to Top
  1. Tomato Genome Consortium
    The tomato genome sequence provides insights into fleshy fruit evolution.
    Nature, 2012. 485(7400): p. 635-41
    [PMID:22660326]
  2. Du M, et al.
    MYC2 Orchestrates a Hierarchical Transcriptional Cascade That Regulates Jasmonate-Mediated Plant Immunity in Tomato.
    Plant Cell, 2017. 29(8): p. 1883-1906
    [PMID:28733419]
  3. Liu Y, et al.
    MYC2 Regulates the Termination of Jasmonate Signaling via an Autoregulatory Negative Feedback Loop.
    Plant Cell, 2019. 31(1): p. 106-127
    [PMID:30610166]