PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV27348.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 261aa    MW: 29796.9 Da    PI: 8.8081
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV27348.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.43e-1461113155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 ++ +hn+ Er RR+++N+ f++Lr llP+ +   +s+Kls  ++  ++ ++I +Lq
  KZV27348.1  61 KKLNHNASERDRRKKMNTMFSTLRALLPPeD---QSRKLSIPATISRVLKHIPELQ 113
                 6789*************************77...******************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.37360112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-1161113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.11E-1261116No hitNo description
Gene3DG3DSA:4.10.280.103.6E-1261116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.54E-1561128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.3E-1166118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010106Biological Processcellular response to iron ion starvation
GO:0055072Biological Processiron ion homeostasis
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
MVDVSAHFSG FGWPWENPIG PDIYACTEKN SNQNSDSADL QCSPAEFSKF HKVGDVNKIF  60
KKLNHNASER DRRKKMNTMF STLRALLPPE DQSRKLSIPA TISRVLKHIP ELQKEVGALI  120
QKKENLMSKK SKRVFQEEST IDFRKQLRSR KPIRNSSSAV SATRISDQEI VLQISMAKFE  180
EGSFSDVLWC LEKEGFLLQS ASCCQSPGGR VFCNAHLQGQ GSQIMDVSIL KEKVWTLYDK  240
GEEIQLNRTK FLDDYFDVFH Q
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV27348.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022842172.13e-69transcription factor ORG2-like isoform X1
TrEMBLA0A2G9HLC33e-74A0A2G9HLC3_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22262256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.15e-47bHLH family protein