PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV27589.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

G2-like

Protein Properties

Length: 195aa MW: 21872.8 Da PI: 9.0385

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV27589.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	44.7	3e-14	13	42	26	55
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 +AtPk+++++m+vkgLtl h+kSHLQkYRl KZV27589.1 13 EATPKALKHAMGVKGLTLFHLKSHLQKYRL 42 69***************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	6.2E-12	12	43	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.8E-9	13	43	IPR006447	Myb domain, plants
Pfam	PF14379	2.7E-14	83	128	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence Send to blast
MPYDRLYFNI FAEATPKALK HAMGVKGLTL FHLKSHLQKY RLGKQSGKDP GEASKDGSYD 60 LDSPHARSSP RNLQSADIKE NYQAKEALRA QMEIQRKLHL QVEAEKHMQI RQDAERRYMA 120 MLEQACKMLA DQVIGIGVVN DDGDGLQGNG MKTSFSTSLN PLEAFPTQSA DDFGSHSPEM 180 ASPELHRRRA KVCAR

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator (PubMed:26586833). Acts redundantly with PHR1 as a key component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). {ECO:0000269\|PubMed:26586833}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV27589.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated in roots by low Pi. {ECO:0000269\|PubMed:26586833}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022868279.1	5e-78	protein PHR1-LIKE 3-like
Swissprot	Q94A57	9e-32	PHL2_ARATH; Protein PHR1-LIKE 2
TrEMBL	A0A2Z7AZV9	1e-143	A0A2Z7AZV9_9LAMI; Uncharacterized protein
STRING	XP_009620524.1	7e-69	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA9764	20	27

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	2e-33	G2-like family protein

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546]