PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV27590.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family G2-like
Protein Properties Length: 265aa    MW: 29696.3 Da    PI: 6.6884
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV27590.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like107.57e-341569155
     G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                k+rlrWt+eLH+rFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  KZV27590.1 15 KQRLRWTHELHDRFVDAVAQLGGPDRATPKGVLRIMGVQGLTIYHVKSHLQKYRL 69
                79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.1741272IPR017930Myb domain
SuperFamilySSF466896.45E-181469IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.5E-321470IPR009057Homeodomain-like
TIGRFAMsTIGR015574.4E-261570IPR006447Myb domain, plants
PfamPF002492.5E-91768IPR001005SANT/Myb domain
PfamPF143791.2E-23101147IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MEPTGGGNNA NLASKQRLRW THELHDRFVD AVAQLGGPDR ATPKGVLRIM GVQGLTIYHV  60
KSHLQKYRLA KYLPDSSSDG TKPDKKESED MLSSLDGSSG MQINEALKLQ MEVQKRLHEQ  120
LEVQRQLQLR IEAQGKYLKK IIEEQQRISG VVPEVPGTDD NFPESDTKTD PATPAPTFEP  180
PFPDKSVKRH IIDKSLSLDE SFSRHEPQTP DSDFRSTSPV LGPSERPEKK LRVNDDAAFS  240
KPAMEFTHSM ESSFNPLSSS HLHFS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A9e-241572259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B9e-241572259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A9e-241572259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C9e-241572259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D9e-241572259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F9e-241572259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H9e-241572259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J9e-241572259Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00252DAPTransfer from AT2G01060Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV27590.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012848512.11e-130PREDICTED: protein PHR1-LIKE 1-like isoform X2
RefseqXP_020554068.11e-130uncharacterized protein LOC105175200
SwissprotQ9SJW01e-111PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A2Z7B7B60.0A0A2Z7B7B6_9LAMI; Myb family transcription factor APL
STRINGMigut.M01479.1.p1e-129(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27962451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.13e-87G2-like family protein