PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV27640.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family NAC
Protein Properties Length: 202aa    MW: 23257.7 Da    PI: 10.2021
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV27640.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM55.42.1e-173211752128
         NAM  52 kaeekewyfFskrdkkyatgkrknra........tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                 k++ ++++fF +  ++ya+g+rk+r          ++ +W++tgk+k+v+  +  l+g kk++v+y  +++ +k+ k++W+mh+y+l
  KZV27640.1  32 KKDGSSVHFFYRIINAYASGQRKRRRisgrestiKAHVRWHKTGKTKSVMG-NVLLKGFKKIMVLYapSKKGSKPDKCNWIMHQYHL 117
                 4456688******************75777776555889***********9.9999**********7756777888*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100517.8681136IPR003441NAC domain
SuperFamilySSF1019411.07E-1932136IPR003441NAC domain
PfamPF023651.5E-638117IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MLLHWVSKEF HWILLLLSQR NKFIQYNCSG AKKDGSSVHF FYRIINAYAS GQRKRRRISG  60
RESTIKAHVR WHKTGKTKSV MGNVLLKGFK KIMVLYAPSK KGSKPDKCNW IMHQYHLGAN  120
EDEQEGEYVV SKIFYQPQKG TEYNETFIVK EESDLGLTQA IPKTPKMSTP DPPRSQYTPS  180
FNGGSDDYLI KSFVQVGETF TP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15256RKRRR
25357KRRRI
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV27640.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097382.15e-76SUPPRESSOR OF GAMMA RESPONSE 1
TrEMBLA0A2Z7B7G41e-150A0A2Z7B7G4_9LAMI; NAC domain-containing protein 8-like
STRINGcassava4.1_027882m3e-61(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA81752229
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14490.14e-38NAC domain containing protein 85