PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV28133.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family Nin-like
Protein Properties Length: 305aa    MW: 34952.7 Da    PI: 4.61
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV28133.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK83.51.9e-26138187352
      RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                 k ++ +++s+yF++pi++AAkeL+v+lT+LK++CR++GI+RWPhRk+ sl
  KZV28133.1 138 KILTRQMISEYFYMPITQAAKELNVGLTLLKKRCRELGIQRWPHRKLMSL 187
                 78999******************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.086125207IPR003035RWP-RK domain
PfamPF020421.1E-21140187IPR003035RWP-RK domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0051302Biological Processregulation of cell division
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
METQHSTWSN YEAIPKEKYE DVFSFPTQLP PLDFSGHFAA TDVLNEFIIQ EDFVDGVPLV  60
GMLLNDHFYP SLDPVPYNPA TDLIPETSEV VQRDGQAVEL NDYGKICTVQ DQEEVETKES  120
MKSWRPEVMV MKSSSSSKIL TRQMISEYFY MPITQAAKEL NVGLTLLKKR CRELGIQRWP  180
HRKLMSLQTL IKNVQELGKD GGEVKLRDAI AILEQEKKLM EEIPDLQLED KTKRLRQACF  240
KANYKKRRLM GSVADSSTKS TNNPSSYDQS TPNSSLQCIV DADEDELEYL FSDYISPKSA  300
DFMMF
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV28133.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022883627.15e-83protein RKD3-like
TrEMBLA0A2Z7B1K60.0A0A2Z7B1K6_9LAMI; Uncharacterized protein
STRINGEOY218632e-72(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA42742142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.14e-52RWP-RK domain-containing protein