PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV28833.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family HB-other
Protein Properties Length: 164aa    MW: 18881.5 Da    PI: 6.5306
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV28833.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox32.91.1e-1017432854
                HHHHHHHHHCTS-HHHHHHHHHHHHHH CS
    Homeobox 28 eereeLAkklgLterqVkvWFqNrRak 54
                +++  LAk+l+L  rq+ vWFqNrRa 
  KZV28833.1 17 KQKMALAKRLNLRPRQIEVWFQNRRAS 43
                68899********************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000863.40E-61642No hitNo description
SuperFamilySSF466898.13E-81745IPR009057Homeodomain-like
PROSITE profilePS5007110.5271747IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.7E-91742IPR009057Homeodomain-like
PfamPF000464.5E-81743IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
MVVGRSCIPE PLRVIQKQKM ALAKRLNLRP RQIEVWFQNR RASSSIAETQ SKRHRQEPQT  60
VDFEEANPST KRQKPYNPIL SLLEEEEDET EPAPEPPSED LSAMFTTLQQ ELSSSTSCDS  120
TALDDFEFLP ISAAQQYSQK FRVLHLCFSR KKLKVILSTD LIFL
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV28833.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075482.13e-17uncharacterized protein LOC105159948
TrEMBLA0A2Z7B4N51e-115A0A2Z7B4N5_9LAMI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06710.13e-11homeobox from Arabidopsis thaliana