PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV29300.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 354aa    MW: 39052.1 Da    PI: 6.9957
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV29300.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.56.5e-29171231259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dgy+WrKYGqKe+ gs++prsYYrCt++   +Cp+kk+v+r ++dp ++e++Y+g+H+++
  KZV29300.1 171 EDGYTWRKYGQKEIMGSTYPRSYYRCTHQkfyDCPAKKQVQRLNNDPFTFEVIYRGTHTCH 231
                 7****************************9999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182901.31E-25169232IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.6E-27169232IPR003657WRKY domain
SMARTSM007741.6E-35170232IPR003657WRKY domain
PfamPF031066.2E-26171231IPR003657WRKY domain
PROSITE profilePS5081121.172171233IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MEEALPLLYH GCKLAKDLEK SLQNSANNPE IILKSSEEII SIFSKIKEKI SLEQTSINVG  60
HDIGVGIQQW LKTSTVVLSG RDQPTPSHDP MHGHKISRMK GIQLPYEETG IGFKDIVQGS  120
GGPASDKQLL INAPDSTVTL PKQRKRKDSV SDKIVKRGAA PIMGNLELPP EDGYTWRKYG  180
QKEIMGSTYP RSYYRCTHQK FYDCPAKKQV QRLNNDPFTF EVIYRGTHTC HMSSTTPSTG  240
EPLPDQGPPS FTDTAAGIHL PQPFSSSLSA TTHWLSMQIF HDLVGVSAAV ASTNTAVARV  300
DSCGSAGPSA VRFHDYQLPV VDMADAMFNS NSSSSNSMDL IFSEHKWDLE EKKE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A4e-18171230968OsWRKY45
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00304DAPTransfer from AT2G40740Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV29300.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076813.11e-103WRKY transcription factor 55
TrEMBLA0A2Z7B5J70.0A0A2Z7B5J7_9LAMI; WRKY transcription factor 55
STRINGMigut.F00573.1.p1e-89(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA92801824
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.14e-44WRKY DNA-binding protein 55