PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV29365.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 257aa    MW: 29041.6 Da    PI: 5.5683
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV29365.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.35.8e-08145189655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++ r+RR++i ++ ++L +l+P       +K++ ae+   A +YIk Lq
  KZV29365.1 145 SIAARQRRRKITDKTQQLGKLIPGG-----QKMNTAEMFGAAHKYIKFLQ 189
                 6788*******************86.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.589139188IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.06E-11142200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-10142200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.79E-9142192No hitNo description
SMARTSM003531.3E-9145194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-5145189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MALSNYSYWD TFHQFNAETT VFAQTEANEQ LPSELQGCSD YLDFGDYVYS CNSTTDHLFN  60
QHSMFYSSEI NYDYLLPGHF QEVLPKRQKL AACGFQEYSL EVPVPPLPEY PPLMAPPVYR  120
SYATCDGGGV KRQPATSGGS LSAQSIAARQ RRRKITDKTQ QLGKLIPGGQ KMNTAEMFGA  180
AHKYIKFLQA QVGILEFAVK SYDHQENKAS SFPEEEEQHY LHGLLESPLI QEKLFSAEKC  240
LVPKTFVQSL NIDYQSS
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV29365.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022893750.13e-57transcription factor bHLH52-like
RefseqXP_022893751.13e-57transcription factor bHLH52-like
TrEMBLA0A2Z7B6F90.0A0A2Z7B6F9_9LAMI; Basic helix-loop-helix family protein
STRINGMigut.H01308.1.p2e-45(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA38562246
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34820.12e-21bHLH family protein