PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV29487.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 147aa    MW: 16338.8 Da    PI: 8.6913
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV29487.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.94.8e-0539721654
                HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH 16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                + ++ + L++l+ +      +K + a++L +A+eYIk L
  KZV29487.1 39 VSERVSALQQLVSPY-----GKTDTASVLFEAMEYIKFL 72
                556667778888777.....9****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.99E-52177No hitNo description
PROSITE profilePS5088810.9562372IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-72481IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-103084IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009739Biological Processresponse to gibberellin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MMEHKRSLNT LDQSSFVNLL PKRLKTDVTL SSKDKKEKVS ERVSALQQLV SPYGKTDTAS  60
VLFEAMEYIK FLHEQVKVLS APYIYSVPTT RPLEMETCNS LKERGLCVVP ISLIDGVASS  120
NGADIWAPIK TGLNFRRSGS DESSVIT
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV29487.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011091560.16e-71transcription factor bHLH113 isoform X1
RefseqXP_011091561.13e-71transcription factor bHLH113 isoform X2
RefseqXP_011091562.13e-71transcription factor bHLH113 isoform X2
SwissprotQ7XJU23e-51BH153_ARATH; Transcription factor bHLH153
TrEMBLA0A2Z7B7C11e-104A0A2Z7B7C1_9LAMI; Uncharacterized protein
STRINGMigut.N03067.1.p1e-64(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10428811
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.51e-53bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]