PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV29510.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 232aa    MW: 25270.3 Da    PI: 8.2094
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV29510.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.22.6e-203381355
         AP2  3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++aa+++l+g
  KZV29510.1 33 FRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAALSLRG 81
                8*******.**********883....5*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103223.1173289IPR001471AP2/ERF domain
PfamPF008472.8E-133281IPR001471AP2/ERF domain
SMARTSM003803.7E-353295IPR001471AP2/ERF domain
CDDcd000181.30E-173288No hitNo description
SuperFamilySSF541711.37E-213389IPR016177DNA-binding domain
PRINTSPR003672.9E-103344IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.7E-313388IPR001471AP2/ERF domain
PRINTSPR003672.9E-105571IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MPRGRVAARQ AVEVAAENGG EANGSGGSRE IRFRGVRKRP WGRFAAEIRD PWKKTRVWLG  60
TFDSAEDAAR AYDAAALSLR GPKAKTNFGL PANGNGFPDF SPPNPILARI DANPNVPFLN  120
SRFYPREHQI IAQQRPTSSG MSSTVESFSG PRQLPQLPTR FVQRIRNPSL PSMAPDDCHS  180
DCDSSSSVVD DAECDIASSS CKKPLPFDLN MPPPVDVSAA DLDELYCTAL RL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-192788971Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV29510.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012849126.14e-95PREDICTED: ethylene-responsive transcription factor 3-like
SwissprotQ9SXS82e-53ERF3_TOBAC; Ethylene-responsive transcription factor 3
TrEMBLA0A2G9I2B81e-101A0A2G9I2B8_9LAMI; Uncharacterized protein
STRINGMigut.M01719.1.p2e-94(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33302347
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.11e-30ethylene responsive element binding factor 3