PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV29551.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 289aa    MW: 31846.9 Da    PI: 4.9119
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV29551.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.67.1e-30148206259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  D ++WrKYGqK++kgs++pr+YYrC+++ gC ++k+vers +dp+++++ Y+g+H h+
  KZV29551.1 148 ADSWAWRKYGQKPIKGSPYPRNYYRCSTSkGCGARKQVERSPNDPTIFVVSYTGDHAHP 206
                 69************************9988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.5E-31134208IPR003657WRKY domain
SuperFamilySSF1182902.75E-26141208IPR003657WRKY domain
PROSITE profilePS5081132.535142208IPR003657WRKY domain
SMARTSM007741.8E-34147207IPR003657WRKY domain
PfamPF031065.4E-25149206IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MDDDDWDLHA VVRGCAAPST ATNNPSPITS PPLLHDDENP GLINDLSVDP FQGFHEIYRE  60
FCADQSPPAT ADASTVSFPV GNDFQSFFQQ PSQITNMQRH ENLLLNNPVF VPSSLSFPAA  120
SSQSIRSRRR KNQEMKIVRE MREEDLSADS WAWRKYGQKP IKGSPYPRNY YRCSTSKGCG  180
ARKQVERSPN DPTIFVVSYT GDHAHPRPTH RSSLTGSTRN KLSPAATAVA IDRSKTPLIS  240
SGSPPTTSPP ASCSSFSPPL TEEVDAETVR AEGDCGDEDE GYDLYYDSD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-19138208877Probable WRKY transcription factor 4
2lex_A1e-19138208877Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV29551.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020548861.11e-90probable WRKY transcription factor 27 isoform X1
TrEMBLA0A2G9HFK94e-89A0A2G9HFK9_9LAMI; Uncharacterized protein
STRINGMigut.F00276.1.p4e-78(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA138601014
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.11e-45WRKY DNA-binding protein 27