PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV29650.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

LBD

Protein Properties

Length: 65aa MW: 7761.93 Da PI: 10.2979

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV29650.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	33.9	8.9e-11	2	52	51	101
DUF260 51 eeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkeel 101 ee+r+++++s++ eA++r ++Pv+G v++ ++l+ ++e+l++el+ ++++l KZV29650.1 2 EEKRSRTAESMMIEARIRRENPVHGPVEIQRRLRDEIEKLQNELEIVQSQL 52 689********************************************9985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50891	9.164	1	52	IPR004883	Lateral organ boundaries, LOB
Pfam	PF03195	6.5E-9	2	49	IPR004883	Lateral organ boundaries, LOB

Sequence ? help Back to Top
Protein Sequence Length: 65 aa Download sequence Send to blast
MEEKRSRTAE SMMIEARIRR ENPVHGPVEI QRRLRDEIEK LQNELEIVQS QLHSAVPRRK 60 TKLVD

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV29650.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2866	17	52