PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV30070.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 285aa    MW: 31392.1 Da    PI: 9.0792
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV30070.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.71.9e-20148197255
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr ++ +grW AeIrd       r r++lg+f+taeeAa+a++aa+++l+g
  KZV30070.1 148 SYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARRLRG 197
                 69*******.**********32....25*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.94E-16147206No hitNo description
SuperFamilySSF541718.5E-22148206IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.1E-29148205IPR001471AP2/ERF domain
PfamPF008472.7E-14148197IPR001471AP2/ERF domain
PROSITE profilePS5103222.761148205IPR001471AP2/ERF domain
SMARTSM003802.1E-33148211IPR001471AP2/ERF domain
PRINTSPR003671.2E-10149160IPR001471AP2/ERF domain
PRINTSPR003671.2E-10171187IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MNINNFLMLR NVAFFPELEL FDPLQMLQQR NQFDSEPGFR SLSPVPAPEV AENSNRSSVS  60
GGLTHCYPFS ISGEENRKGA ASEDNHTVLE GIAAVVGEHV LFGRRGAEIN KDSFCSSSSE  120
EKFFRNISVG NDDDPRKEDN HGIGVKKSYR GVRKRPWGRW SAEIRDRIGR CRHWLGTFDT  180
AEEAARAYDA AARRLRGSKA RTNFQIPPVL PLPSLNSCSD SPSSEAKKLR ANGKSGKVQN  240
VSRNCCVVTS AGQLFSSSPV AESRRGVNLE LGLQFNGGFK DGLVL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A8e-17147206161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
5wx9_A1e-16142204771Ethylene-responsive transcription factor ERF096
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV30070.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7B8N10.0A0A2Z7B8N1_9LAMI; Uncharacterized protein
STRINGXP_004305488.14e-53(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA115522225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.17e-25ERF family protein