PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV30113.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 279aa    MW: 30808.7 Da    PI: 5.2767
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV30113.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.41.1e-1261107354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  +h+e+ErrRR+riN  +++L+ +lP+        K +Ka+ L +Av+ +k+L
  KZV30113.1  61 NSHKEAERRRRKRINGHIATLKAILPNvH------KTDKASLLGEAVRRVKEL 107
                 68*************************55......*************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.20558107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.5E-1361111IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.8E-1061107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.2E-1361110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.74E-462110No hitNo description
SMARTSM003531.9E-1164113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MFSVNPANFY DHLGNCSGSY DSILQRVPLS SSPPLTEDNR LNELDHSPDS TEEAKAAAAS  60
NSHKEAERRR RKRINGHIAT LKAILPNVHK TDKASLLGEA VRRVKELRQA ATEEYSTPID  120
DQTNDEAAIF PTETDELRAR DDARLDPGPE LGDQTNDEAA IFPTETDELR VCPCEGDSGL  180
IKATLCCEDR PEMMLDLIQA LNSVKAKVMR AEMCTVGGRT RNILWVELVS SNVGSERDLG  240
LGKLRQVLKT VVDKSTLLAG SGQFLPGSKR HRLWKMDAL
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV30113.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022884570.13e-69transcription factor bHLH30-like
TrEMBLA0A2Z7B7F80.0A0A2Z7B7F8_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA72832231
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.14e-31bHLH family protein