PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV30114.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 241aa    MW: 26713.7 Da    PI: 8.0488
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV30114.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.78.6e-1359105354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  +h+e+ErrRR+riN  +++L+ +lP+        K +Ka+ L +Av+ +k+L
  KZV30114.1  59 NSHKEAERRRRKRINGHIATLKAILPNvH------KTDKASLLGEAVRRVKEL 105
                 68*************************55......*************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.20556105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.0E-1059105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-1359114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.62E-460108No hitNo description
Gene3DG3DSA:4.10.280.102.6E-1360119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-1162111IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MFTFSPSVYE LGNCWETYDS ILQRVPLSSS PPLTEDNRLN GLDLSPKSTE EAKAAAASNS  60
HKEAERRRRK RINGHIATLK AILPNVHKTD KASLLGEAVR RVKELRQATA EYLTPIDDQT  120
NDEAAIFPTE TDELRVCPCE GDSGLIKATL CCEDRPEMML DLIQALNSVK AKVMRAEMCT  180
VGGRTKNILW VELVSSNVGS ERDLGLGKLR QVLKMVVEKS TLLAGSGQIL SGCKRPRFYH  240
L
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV30114.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022884570.16e-81transcription factor bHLH30-like
TrEMBLA0A2Z7B6J81e-178A0A2Z7B6J8_9LAMI; Uncharacterized protein
STRINGMigut.H02300.1.p2e-70(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA72832231
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.14e-31bHLH family protein