PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV30908.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 294aa    MW: 33818.2 Da    PI: 8.3489
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV30908.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.81.9e-13121174155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksLq 55 
                 +++ hn+ Er RR +iN +f  Lr+llP  +   +skK  s  +i+ ++ +YI +Lq
  KZV30908.1 121 KKMDHNAKERIRRMKINASFLALRSLLPDsR---RSKKrWSAPSIVDRVLKYIPELQ 174
                 6889*************************66...88888***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.93E-10118178No hitNo description
PROSITE profilePS5088813.706120173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-12121192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.72E-15121193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.7E-10121174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.4E-9126179IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MSGLPLSNPY NTSDIYSEFL SHLDPLDDYS LQTYQKTLQP DCDINLTGTR ERTINPEAVS  60
EDEQHNLARK QEVASVKGQK RKRISNPSSK KTKRKTKNSD CDVDATLEQI GAQAEGTSVA  120
KKMDHNAKER IRRMKINASF LALRSLLPDS RRSKKRWSAP SIVDRVLKYI PELQNQIQEL  180
KSKKQSYEQH EQSPKSIENP SSDLDEDRSI SITRINQNEA IVQICMRSLN DESRKDSPFA  240
NMLQKVEDEG YLIRSASTLY VSEDRICHHL HIQVYTFYFI FCAFDCLFIA LVPR
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV30908.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7BFK30.0A0A2Z7BFK3_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1545167
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71200.17e-29bHLH family protein