PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV31350.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 561aa    MW: 62287 Da    PI: 8.522
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV31350.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.36.6e-28297355160
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                 ldDgy+WrKYGqK vkg+++ rsYY+Ct+++C +kk+vers+  +  ++i Y geH+h+k
  KZV31350.1 297 LDDGYSWRKYGQKLVKGNQYIRSYYKCTHPNCLAKKQVERSH-GGVKTDINYLGEHKHPK 355
                 59****************************************.9999***********85 PP
2WRKY64.71.5e-20467515259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dgy+WrKYGqK         sYYrC+ agCpvkk+ver+++dp++v++tYeg+H h+
  KZV31350.1 467 NDGYRWRKYGQK---------SYYRCSNAGCPVKKHVERASHDPQLVITTYEGKHGHD 515
                 8**********9.........8***********************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.6E-25286355IPR003657WRKY domain
PROSITE profilePS5081123.273292356IPR003657WRKY domain
SuperFamilySSF1182906.28E-23295355IPR003657WRKY domain
SMARTSM007743.3E-31297355IPR003657WRKY domain
PfamPF031069.6E-22298354IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.3E-24452517IPR003657WRKY domain
SuperFamilySSF1182901.12E-21459517IPR003657WRKY domain
PROSITE profilePS5081125.626461517IPR003657WRKY domain
SMARTSM007748.3E-25466516IPR003657WRKY domain
PfamPF031061.8E-14467514IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 561 aa     Download sequence    Send to blast
MQQGQNLQND SHLFKSAQEE YPVVHDAELG NSSRKNLENI NQSVKLDTDS LATTHIDLHL  60
SQNADVNDDV LEHHREERTM SLIREKDSDL LRQKPSANHG AIERKFGLNQ VSHKTRKEKS  120
EGQTNLVKRQ KDSDNIQPVQ SSRGIPTSQT QEKNHTSYIK PEKTSEYLRA GKNDVGCFSL  180
QSDKITISSM SSEKLGAFPK QIAATEEPRQ SLDDGPYALD GKEKAFFMQK QTVSKDLVQM  240
PSSCVREILS PSDEQGFAYS VKFEKVKLQP RRNPDSRIQG SQSEAESTHS KASDKILDDG  300
YSWRKYGQKL VKGNQYIRSY YKCTHPNCLA KKQVERSHGG VKTDINYLGE HKHPKAQHSP  360
QVASSSEVRV QEIPIETTSE AGSIITRGEA CQHSPPAETS TPTIVGSGDG VTAVVSPSNA  420
GSHDKPDCPD SKRQKILTSS ADGTFLSEPN NESRHVVQTR SVVDIINDGY RWRKYGQKSY  480
YRCSNAGCPV KKHVERASHD PQLVITTYEG KHGHDMPLSR TLSRSTAEKD SAKSKAGGES  540
TSKSIENKSV GPEMGVHIHA N
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-28288517174WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV31350.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011100622.11e-140WRKY transcription factor 1 isoform X1
TrEMBLA0A2Z7BAT10.0A0A2Z7BAT1_9LAMI; WRKY transcription factor 1
STRINGXP_009605529.12e-89(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45582242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G04880.23e-62zinc-dependent activator protein-1