PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV31556.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

FAR1

Protein Properties

Length: 133aa MW: 15127.1 Da PI: 4.7755

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV31556.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	33.1	1.9e-10	71	116	2	47
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 Y++YA+ GFsvrk +++ ++++ei +++f+Cs+eg+++e++++ KZV31556.1 71 LYCQYAHAKGFSVRKGEQRCFSHSKEIQSKEFNCSCEGSKDEKRSS 116 59**************************************998876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	4.0E-8	71	116	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 133 aa Download sequence Send to blast
MEVENSLSLE ELEENHIEEV VCREFPTTQC GLPNLSRSEI EVPTENSIVD VLKSKLEVGS 60 IVNNLEEAYL LYCQYAHAKG FSVRKGEQRC FSHSKEIQSK EFNCSCEGSK DEKRSSKKIS 120 VYHGLLELIV KLD

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV31556.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012836749.1	2e-17	PREDICTED: protein FAR1-RELATED SEQUENCE 5-like
Refseq	XP_012856914.1	1e-17	PREDICTED: protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A2Z7BHY5	4e-90	A0A2Z7BHY5_9LAMI; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA16786	2	3