PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV31685.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family DBB
Protein Properties Length: 256aa    MW: 27939.4 Da    PI: 4.4104
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV31685.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box21.93.5e-071154441
    zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41
                ++C+ ++      fC++++ +lC +C  ++H        H +v+
  KZV31685.1 11 KICDACKTSLPAVFCRQDSAFLCTTCDGNIHAAnelasrHARVS 54
                69******99*********************6567777777766 PP
2zf-B_box24.46e-085496440
    zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg.......Htvv 40
                  C+ +e+ +++  C+ +   lC++C   +H         H++ 
  KZV31685.1 54 SLCDVCEQAPASVTCKADAAALCATCDHDIH-TvnplahrHERL 96
                68****************************8.446777445555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011910.381855IPR000315B-box-type zinc finger
SMARTSM003361.2E-9855IPR000315B-box-type zinc finger
PfamPF006432.8E-51154IPR000315B-box-type zinc finger
CDDcd000211.31E-41255No hitNo description
PROSITE profilePS5011910.7225198IPR000315B-box-type zinc finger
PfamPF006437.8E-65498IPR000315B-box-type zinc finger
CDDcd000211.62E-65598No hitNo description
SMARTSM003368.3E-75698IPR000315B-box-type zinc finger
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MASETWSLTS KICDACKTSL PAVFCRQDSA FLCTTCDGNI HAANELASRH ARVSLCDVCE  60
QAPASVTCKA DAAALCATCD HDIHTVNPLA HRHERLPIIP LFNAASAMRS PPPPSTVMIG  120
DEFSEEEAEA ASWLLNDPSS KLDDESESAL YKSEESLFKN LDPCLDLDLI SYEQKPKNGV  180
MNGKEKYYSS DGVVPVHQCK NEFESGQIPG PVVDGFPTCE VNCPVSNPFM YNFTSQSICQ  240
TVRSSSFILL LFSDLQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV31685.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082019.19e-92zinc finger protein CONSTANS-LIKE 4-like
TrEMBLA0A2Z7BC970.0A0A2Z7BC97_9LAMI; Zinc finger protein CONSTANS-LIKE 4-like
STRINGMigut.A00403.1.p2e-81(Erythranthe guttata)
STRINGMigut.E01434.1.p1e-81(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10352376
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24930.15e-46CONSTANS-like 4