PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV31772.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 367aa    MW: 41447.8 Da    PI: 5.5487
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV31772.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.92.4e-29133193259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 dDg++WrKYGqK++ g+++prsYYrCt++   +C+++k+v+rs++dp++++itY+g+H+++
  KZV31772.1 133 DDGFSWRKYGQKDILGAKYPRSYYRCTYRlvqDCWATKQVQRSDDDPTIFDITYRGTHTCN 193
                 8***************************9999***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.0E-28125194IPR003657WRKY domain
PROSITE profilePS5081120.966127190IPR003657WRKY domain
SuperFamilySSF1182907.45E-26131194IPR003657WRKY domain
SMARTSM007743.1E-38132194IPR003657WRKY domain
PfamPF031061.2E-26133192IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009816Biological Processdefense response to bacterium, incompatible interaction
GO:0010150Biological Processleaf senescence
GO:0010193Biological Processresponse to ozone
GO:0010200Biological Processresponse to chitin
GO:0031347Biological Processregulation of defense response
GO:0042542Biological Processresponse to hydrogen peroxide
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0009507Cellular Componentchloroplast
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MESPVNWEYK TLINELTHGM EKAKQLRFHL CTMSENQVQD LLMQRILSSY EKALLILKWT  60
GSKQQDQVVT TAATSVALES SVSVDGSPRS EGLNKNFGDH QDYMKPSKKR KMQPTWTEQV  120
KVNSESGLEG PTDDGFSWRK YGQKDILGAK YPRSYYRCTY RLVQDCWATK QVQRSDDDPT  180
IFDITYRGTH TCNHSTIAVP PPASPDKQET KRDISDYHHQ PQQLNQTLSS LKSNLRVNTE  240
DLNNDEVSPH FSFPSTFASY DSENCYFPFP NLVDGTHQGT YSVTYSPLFL SPAASESNYF  300
TTGTYNPMNS NWGGANLQHP EIDIVSAHAS TANSPIGGVE FSIDPVGLEP HFPFNPTEFF  360
TNSNFEC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-18133192968OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV31772.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020551475.11e-167probable WRKY transcription factor 53
TrEMBLA0A2Z7BBR50.0A0A2Z7BBR5_9LAMI; Putative WRKY transcription factor 53-like
STRINGPGSC0003DMT4000149491e-123(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA18432467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.14e-72WRKY family protein