PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV31825.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family Dof
Protein Properties Length: 202aa    MW: 21383.3 Da    PI: 8.0978
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV31825.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.31.9e-391979262
      zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                ++++lkcprCds ntkfCyynny+lsqPr+fCk+C+ryWtkGGalrn+PvGg++rkn k+s
  KZV31825.1 19 EQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCKRYWTKGGALRNIPVGGSSRKNAKRS 79
                57899****************************************************9886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-281178IPR003851Zinc finger, Dof-type
PfamPF027012.7E-332177IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.8452377IPR003851Zinc finger, Dof-type
PROSITE patternPS0136102561IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MQDPYLYSQI KAQAAQFPEQ EQLKCPRCDS PNTKFCYYNN YNLSQPRHFC KSCKRYWTKG  60
GALRNIPVGG SSRKNAKRSS ADAVNSQQSK RPASSSSPSN ASINNSSSNS SAAASELLPV  120
KGGDSYGGQF GNFIDVSSSF GSLLGSSGGQ YGPDQVGMGS ANSNNGDDGF LNIEEAGESG  180
CWSGGSGLPE LAIYTPSSNF HL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00199DAPTransfer from AT1G51700Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV31825.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022843826.12e-60dof zinc finger protein DOF3.1-like
TrEMBLA0A2Z7BCL81e-144A0A2Z7BCL8_9LAMI; Uncharacterized protein
STRINGMigut.I01007.1.p3e-56(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.12e-40DOF zinc finger protein 1