PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV32836.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 270aa    MW: 30106.2 Da    PI: 5.5166
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV32836.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY85.74.2e-27117176159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDg++WrKYGqK++  s++pr+YYrCt   gC ++k+v+r +edp++ e+tY+g H+++
  KZV32836.1 117 LDDGHSWRKYGQKDILRSNYPRGYYRCTNGkGCLARKQVQRLDEDPTAYEVTYKGLHTCH 176
                 59**************************988***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.7E-28104176IPR003657WRKY domain
PROSITE profilePS5081122.332112179IPR003657WRKY domain
SuperFamilySSF1182901.57E-25113176IPR003657WRKY domain
SMARTSM007745.2E-36117177IPR003657WRKY domain
PfamPF031062.5E-25118176IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MERFPSDSAR ENLENVLKQG GELAKQLQLH LEPQSSSQET LFYLLNEILN TYDRALALLK  60
HGGTGGGAPP GFGGAMVAVM SDSPGSPLTG SPHSSHSDQE DEARRISLEK RVPSSQLDDG  120
HSWRKYGQKD ILRSNYPRGY YRCTNGKGCL ARKQVQRLDE DPTAYEVTYK GLHTCHNNPP  180
IPVIHPQNEL NKPLSHGNQI NQSQQEPFLN IQTSLKIIGS SSDTQDHTPS SSNFNPENNP  240
IFSDDHLLCE DYLLDFMNPA APELNFFNDY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A9e-19117175868OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV32836.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7BLM50.0A0A2Z7BLM5_9LAMI; Putative WRKY transcription factor 53
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA117431922
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24110.11e-26WRKY DNA-binding protein 30