PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV32917.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family Dof
Protein Properties Length: 519aa    MW: 57206.3 Da    PI: 6.4042
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV32917.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1252.4e-39141200261
      zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                 ++k+l+cprC+s++tkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvP+G+grrknk++
  KZV32917.1 141 PDKILPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPIGAGRRKNKNA 200
                 7899*****************************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-30135198IPR003851Zinc finger, Dof-type
PfamPF027018.4E-32143199IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.779145199IPR003851Zinc finger, Dof-type
PROSITE patternPS013610147183IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 519 aa     Download sequence    Send to blast
MSEVKDPKIK LFGKTIDLLE PAWEAVPPTS MTGGRASAQS CDAGDMDNTI QDPPCSSDSD  60
GRFERDAEEQ ESHERLSCPN QNNSKEEEHN QPSTREESKE CNSTQPTNED SHEDTETEKT  120
SKTEDDQCET SNSHEKTLKK PDKILPCPRC NSMDTKFCYF NNYNVNQPRH FCKNCQRYWT  180
AGGTMRNVPI GAGRRKNKNA ISQFRHLTVQ EALHGARVEL PNGIHHPSLN PNGTVLAFNS  240
DSRFVNQSSH EILANTEAHS SGTSASLNNG VSKNVFPEVL MQNPNVIPQL PCFPGAPWPY  300
PWNSVPWSTP LSSPTFGAAT FPLPFCPTLA PYWGCAVPGT WNIPWVITPA SSQNQTPPSS  360
GPDSPTLGKH SRDDGNVLKP ANGRAEGGSS RNVDSEKNLW VPKTLRIDDM GEAAKSSMWE  420
TLGIKNDGVN AVSGSGLFKA FRSRSKGGVK PHVVETSTVL QANPAALSRS LSFHESSNQQ  480
FPEQKYINRV GDWHAVPVVS GQDKIRWHCC LLEFYYPDG
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV32917.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011098639.10.0cyclic dof factor 2-like
TrEMBLA0A2Z7BFW20.0A0A2Z7BFW2_9LAMI; Cyclic dof factor 2
STRINGVIT_14s0108g00980.t011e-154(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53224122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39660.22e-88cycling DOF factor 2