PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV33201.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 316aa    MW: 35446.3 Da    PI: 5.0314
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV33201.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.41.6e-102382781055
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 r+RR++iN+++  L+ l+P+      +K++ +++Le+AveY+k Lq
  KZV33201.1 238 RKRREKINERLRILQGLVPNG-----TKVDISTMLEEAVEYVKFLQ 278
                 9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.11228277IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.4E-14228294IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-12233288IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.7E-11234283IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.93E-11237282No hitNo description
PfamPF000107.8E-8238278IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MELLGAAYEG EWGSFNGTCD DEEDFMSGLL RNQSDPYDRS NFSISSCFWP AQDSIMAAAQ  60
GDDVLLPFSS HEKCYPMAVD YGLRESKNDD PRCHSVTYDN VLRGDHAFLY QETSKDSVGL  120
NENLPEPPIS EPTEQDRQRN PRESSKRRLR MPSEVHKNKR NIKMKIHLDG NGINNCNNID  180
SSDVLVRRST SSCSIEDDSV YGSQELYGGF ASSSDSKGNG RGRASRGSAT DPQSLYARKR  240
REKINERLRI LQGLVPNGTK VDISTMLEEA VEYVKFLQLQ IKLLSSDELW MYAPIAYNGM  300
GIGLDLRTKA PKSQES
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1237242RKRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV33201.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011088156.13e-82transcription factor bHLH139-like
SwissprotQ7XHI95e-51BH084_ARATH; Transcription factor bHLH84
TrEMBLA0A2Z7BMN10.0A0A2Z7BMN1_9LAMI; Uncharacterized protein
STRINGMigut.B00443.1.p4e-71(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA63922101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.13e-47bHLH family protein